Nenad Vilendečić
Courses
Faculty of Natural Sciences and MathematicsBibliography
Journal papers
Solving roman domination in multiplex networks: Algorithms and biological network applications
| DOI | 10.1016/j.asoc.2026.116490 |
|---|---|
| Journal | APPLIED SOFT COMPUTING |
| Year | 2026 |
| Authors | Milana Grbić, Nenad Vilendečić, Aleksandar Kartelj, and Dragan Matić |
| Volumen | 204 |
| Web address | https://www.sciencedirect.com/science/article/abs/pii/S1568494626019381#section-snippets |
Conference papers
Graph Embedding-Based Identification of Protein Complexes in Dynamic PPI Networks
| Scientific Conference | 2026 25th International Symposium INFOTEH-JAHORINA (INFOTEH) |
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| DOI | 10.1109/INFOTEH68759.2026.11477727 |
| Publication | 2026 25th International Symposium INFOTEH-JAHORINA (INFOTEH) Proceeding |
| Year | 2026 |
| Authors | Nenad Vilendečić, Miloš Radovanović, and Milana Grbić |
| Page from | 1 |
| Page to | 6 |
| Web address | https://ieeexplore.ieee.org/document/11477727 |
Towards protein complex identification in dynamic PPI networks using embeddings
| Scientific Conference | 6th Belgrade Bioinformatics Conference |
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| Publication | Book of Abstracts: 6th Belgrade Bioinformatics Conference |
| Year | 2026 |
| Authors | Nenad Vilendečić, Milana Grbić, Miloš Radovanović, and Dragan Matić |
| Page from | 84 |
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| Web address | https://imagine.imgge.bg.ac.rs/handle/123456789/3396 |
How Much Does Dynamic PPI Network Construction Matter in Protein Complex Detection?
| Scientific Conference | General Conference DYNALIFE – Towards a New Paradigm in Theoretical Biology |
|---|---|
| Year | 2026 |
| Authors | Nenad Vilendečić, Milana Grbić, Miloš Radovanović, and Dragan Matić |
Structural Roles of IDPs in Dynamic PPI Networks
| Scientific Conference | 4TH ML4NGP MEETING on Machine Learning and Non-globular proteins |
|---|---|
| Publication | ABSTRACT BOOK 4th ML4NGP MEETING on Machine Learning and Non-globular proteins |
| Year | 2026 |
| Authors | Nenad Vilendečić, Milana Grbić, Miloš Radovanović, and Dragan Matić |
| Page from | 66 |
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| Web address | https://ml4ngp.eu/wp-content/uploads/2026/05/4th-ML4NGP-meeting_Abstract-book_Warsaw-2026-compressed.pdf |
Who Rules the Network? Dominating Proteins in Multilayer PPI Systems
| Scientific Conference | "Theoretical Biology Meets Big Data: Dynamical Systems, Machine Learning, and Applications in Life Sciences”, The General DYNALIFE Conference |
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| Publication | BOOK OF ABSTRACTS "Theoretical Biology Meets Big Data: Dynamical Systems, Machine Learning, and Applications in Life Sciences”, The General DYNALIFE Conference |
| Year | 2025 |
| Authors | Nenad Vilendečić, Milana Grbić, Dragan Matić, and Aleksandar Kartelj |
| Page from | 34 |
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| Web address | https://935488d0-d130-4687-999d-d745fa5ec1b5.filesusr.com/ugd/369ee7_792cf6f3c386487c97ba31ace1c5ba80.pdf |
Biological Attributes in Classifying Protein Complex Membership
| Scientific Conference | 2025 24th International Symposium INFOTEH-JAHORINA (INFOTEH) |
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| DOI | 10.1109/INFOTEH64129.2025.10959182 |
| Publication | 2025 24th International Symposium INFOTEH-JAHORINA (INFOTEH) Proceeding |
| Year | 2025 |
| Authors | Nenad Vilendečić, Milana Grbić, Milan Predojević, and Miloš Radovanović |
| Page from | 1 |
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| Web address | https://ieeexplore.ieee.org/abstract/document/10959182 |
Assessing the Impact of Graph Embedding Refinements on IDP Classification
| Scientific Conference | 3rd ML4NGP MEETING on Machine Learning and Non-globular proteins |
|---|---|
| Publication | ABSTRACT BOOK 3rd ML4NGP MEETING on Machine Learning and Non-globular proteins |
| Year | 2025 |
| Authors | Nenad Vilendečić, Milana Grbić, and Dragan Matić |
| Web address | https://ml4ngp.eu/wp-content/uploads/2025/05/3rd-ML4NGP-meeting_Booklet_Vilnius-2025_final_15-5-2025.pdf |
Collective Classification Algorithms in Identifying Intrinsically Disordered Proteins within Protein-Protein Interaction Networks
| Scientific Conference | 2nd MEETING on MACHINE LEARNING AND NON-GLOBULAR PROTEINS |
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| Publication | ABSTRACT BOOK 2nd MEETING on MACHINE LEARNING AND NON-GLOBULAR PROTEINS |
| Year | 2024 |
| Authors | Milana Grbić, Nenad Vilendečić, Milan Predojević, and Dragan Matić |
| Page from | 30 |
| Page to | 30 |
| Web address | https://drive.google.com/file/d/1iBXiVA9_ftRT_LmolFJ2rYeB6OwSp65j/view |
Exploration of Intrinsic Disorder Regions through Classification of Intrinsically Disordered Proteins Using PPI Network Structure and Sequence Attributes: A Case Study
| Scientific Conference | Belgrade Bioinformatics Conference – BelBi |
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| Publication | Belbi ABSTRACT BOOK |
| Year | 2024 |
| Authors | Milana Grbić, Milan Predojević, Nenad Vilendečić, and Dragan Matić |
| Web address | https://belbi.bg.ac.rs/abstract/exploration-of-intrinsic-disorder-regions-through-classification-of-intrinsically-disordered-proteins-using-ppi-network-structure-and-sequence-attributes-a-case-study/ |
On similarity of PPI subnetworks induced by important proteins: A case study
| Scientific Conference | 22nd International Symposium INFOTEH-JAHORINA (INFOTEH), Jahorina, Republika Srpska, BiH |
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| DOI | 10.1109/INFOTEH57020.2023.10094129 |
| Year | 2023 |
| Authors | Milica Jaguzović, Nenad Vilendečić, Milana Grbić, and Dragan Matić |
| Web address | https://ieeexplore.ieee.org/abstract/document/10094129 |
Projects
Other
Podrška za učešće istraživačkog tima Bosne i Hercegovine u COST akciji CA21169: Information, Coding, and Biological Function: the Dynamics of Life
Projekat ima za cilj realizaciju aktivnosti koje su podrška učešću istraživačkog tima iz Bosne i Hercegovine u realizaciji COST akcije pod nazivom "Information, Coding, and Biological Function: the Dynamics of Life" (COST Action CA21169 DYNALIFE). Cilj ovog projekta je da podrži uključivanje istraživačkog tima iz Bosne i Hercegovine u istraživačke grupe širom Evrope, kao i da podrži realizaciju aktivnosti usmjerenih na ostvarivanje naučnih rezultata iz domena same Akcije.
| Project Number | 1259089 |
|---|---|
| Status | Archived |
| Type of project | National - Other |
| Organizational unit | Faculty of Natural Sciences and Mathematics |
| Head | Prof. Dragan Matic |
| Participants |
Assoc. Prof. Milana Grbic Nenad Vilendecic Milan Predojevic |
| Business Partner | Ministarstvo civilnih poslova BiH |
| Beginning of realization | 2023-11-01 |
| End of the project | 2024-11-25 |
Obrazovanje nove generacije u oblasti matematike i informatike zasnovano na primjeni velikih jezičkih modela (NextMCS-EduNet)
Podrška realizaciji aktivnosti u okviru COST akcije CA25130. Tim sa Prirodno-matematičkog fakulteta, Univerziteta u Banjoj Luci je glavni predlagač ove COST akcije. Ovo je prva COST akcija čiji je glavni predlagač iz Republike Srpske i koja je odobrena za finansiranje. Kao predstavnici Republike Srpske/BiH, članovi projektog tima su u Management Committee-u i učestvuju u radu radnih grupa (Working Groups), te će takođe, biti i u užem rukovodstvu Akcije.
| Project Number | 1512509 |
|---|---|
| Status | Not archived |
| Type of project | National - Other |
| Organizational unit | Faculty of Natural Sciences and Mathematics |
| Head | Assoc. Prof. Milana Grbic |
| Participants |
Nenad Vilendecic Prof. Dragan Matic |
| Business Partner | Ministarstvo za naučnotehnološki razvoj i visoko obarzovanje Republike Srpske |
| Beginning of realization | 2026-12-01 |
| End of the project | 2027-12-31 |
Realizacija COST akcije Non - globular proteins in the era of Machine Learning
Cilj projekta je podrška realizaciji COST akcije Non - globular proteins in the era of Machine Learning (ML4NGP) CA21160 i realizacija pratećih aktivnosti.
| Project Number | 1259077 |
|---|---|
| Status | Archived |
| Type of project | National - Other |
| Organizational unit | Faculty of Natural Sciences and Mathematics |
| Head | Assoc. Prof. Milana Grbic |
| Participants |
Prof. Dragan Matic Nenad Vilendecic Milica Jaguzovic |
| Business Partner | Ministarstvo za naučnotehnološki razvoj, visoko obrazovanje i informaciono društvo |
| Beginning of realization | 2023-03-01 |
| End of the project | 2023-12-05 |
Primjena dubokog učenja u poboljšanju efikasnosti algoritama optimizacije
Tradicionalne optimizacione tehnike su se pokazale krucijalnim u rješavanju ogromnog broja praktičnih problema od raspoređivanja do bioinformatike. U posljednjih pola vijeka, mnogi algoritmi, ka što su Genetski, Metod promjenljivih okolina, A* pretraga itd,, su uspješno rješavali probleme iz raznovrsnih domena. U ovom milenijumu, one su dodatno poboljšavane raznim hibridizacijama sa (komplementarnim) tehnikama direktno...
| Project Number | 1259114 |
|---|---|
| Status | Archived |
| Type of project | National - Other |
| Organizational unit | Faculty of Natural Sciences and Mathematics |
| Head | Assoc. Prof. Marko Djukanovic |
| Participants |
Prof. Dusko Bogdanic Assist. Prof. Bojan Nikolic Milica Jaguzovic Tatjana Zec Nenad Vilendecic Assoc. Prof. Milana Grbic Milan Predojevic Assoc. Prof. Dimitrije Cvokic |
| Business Partner | Ministarstvo za naučnotehnološki razvoj i visoko obarzovanje Republike Srpske |
| Beginning of realization | 2025-03-01 |
| End of the project | 2025-12-31 |
Analiza bioloških mreža metodama mašinskog učenja
Projekat "Analiza bioloških mreža metodama mašinskog učenja" ima za cilj istraživanje i razvoj novih metoda za analizu bioloških mreža korišćenjem tehnika mašinskog učenja. Istraživanje je fokusirano na probleme u oblasti bioinformatike i računarske biologije, a poseban akcenat će biti stavljen na razvoj i primjenu algoritama koji mogu efikasno da obrade i analiziraju kompleksne biološke podatke predstavljene biološkim mrežama. ..
| Project Number | 1259087 |
|---|---|
| Status | Archived |
| Type of project | National Research |
| Organizational unit | Faculty of Natural Sciences and Mathematics |
| Head | Assoc. Prof. Milana Grbic |
| Participants |
Prof. Dragan Matic Assoc. Prof. Marko Djukanovic Prof. Dusko Bogdanic Nenad Vilendecic Milan Predojevic Tatjana Zec Milica Jaguzovic |
| Business Partner | Ministarstvo za naučnotehnološki razvoj i visoko obarzovanje Republike Srpske |
| Beginning of realization | 2024-04-01 |
| End of the project | 2025-11-03 |
Podrška realizaciji COST akcije CA21160 Non-globular proteins in the era of Machine Learning u Bosni i Hercegovini (ML4NGPB&H)
Cilj projekata " Podrška realizaciji COST akcije CA21160 Non-globular proteins in the era of Machine Learning u Bosni i Hercegovini (ML4NGPB&H)" je da olakša i unaprijedi realizaciju aktivnosti istraživačkog tima iz Bosne i Hercegovine u realizaciji COST akcije "Non-globular proteins in the era of Machine Learning". Kroz ovaj projekat će biti podržano uključivanje istraživačkog tima iz Bosne i Hercegovine u istraživačke grupe širom Evrope u mrežu istraživača ...
| Project Number | 1259088 |
|---|---|
| Status | Archived |
| Type of project | National - Other |
| Organizational unit | Faculty of Natural Sciences and Mathematics |
| Head | Assoc. Prof. Milana Grbic |
| Participants |
Nenad Vilendecic Prof. Dragan Matic Milan Predojevic |
| Business Partner | Ministarstvo civilnih poslova BiH |
| Beginning of realization | 2023-12-01 |
| End of the project | 2024-11-25 |
Razvoj modela i algoritama vještačke inteligencije za rješavanje teških problema kombinatorne optimizacije
Ovaj projekat razmatra dizajniranje novih, efikasnih modela i metoda vještačke inteligencije (VI) u svrhu rješavanja NP-teških, praktično zasnovanih problema kombinatorne optimizacije. Hibridne metode su u posljednjoj deceniji postale dominantne u rješavanju ovakvih problema, uveliko su prevazišle rezultate do tada dominantnih klasičnih meta-heuristika ostvarujući značajne uštede u materijalnim resursima u proizvodnji...
| Project Number | 1259086 |
|---|---|
| Status | Archived |
| Type of project | National Research |
| Organizational unit | Faculty of Natural Sciences and Mathematics |
| Head | Assoc. Prof. Marko Djukanovic |
| Participants |
Nenad Vilendecic Milan Predojevic Assoc. Prof. Dimitrije Cvokic Stefan Kapunac Prof. Dragan Matic Assoc. Prof. Milana Grbic |
| Business Partner | Ministarstvo za naučnotehnološki razvoj i visoko obarzovanje Republike Srpske |
| Beginning of realization | 2024-01-01 |
| End of the project | 2024-12-19 |
Savremene računarske metode u analizi bioloških podataka
1. Publikovanje naučnih radova: Priprema i objavljivanje rezultata istraživanja u naučnim časopisima i konferencijskim zbornicima. 2. Diseminacija rezultata: Učešće na konferencijama, seminarima ili radionicama radi diskusije i razmjene iskustva sa naučnom zajednicom, kako u regionalnim tako i u međunarodnim okvirima. 3. Edukacija: Obuka i uključivanje mladih istraživača u naučno –istraživački rad, te stvaranje uslova za unapređenje ...
| Project Number | 1259115 |
|---|---|
| Status | Archived |
| Type of project | National Research |
| Organizational unit | Faculty of Natural Sciences and Mathematics |
| Head | Prof. Dragan Matic |
| Participants |
Prof. Dusko Bogdanic Vladan Jaguzovic Milica Jaguzovic Assoc. Prof. Marko Djukanovic Milan Predojevic Nenad Vilendecic Assoc. Prof. Milana Grbic Assist. Prof. Bojan Nikolic |
| Business Partner | Ministarstvo za naučnotehnološki razvoj i visoko obarzovanje Republike Srpske |
| Beginning of realization | 2025-04-01 |
| End of the project | 2026-08-24 |
